Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A074X4Y9 | A0A074X4Z2 | Shikimate-5-dehydrogenase. | Putative amino acid permease. | 0.400 |
A0A074X4Y9 | A0A074X9U7 | Shikimate-5-dehydrogenase. | Shikimate. | 0.717 |
A0A074X4Y9 | A0A074XHC2 | Shikimate-5-dehydrogenase. | 2-epi-5-epi-valiolone synthase-like protein. | 0.898 |
A0A074X4Y9 | A0A074YKG8 | Shikimate-5-dehydrogenase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.899 |
A0A074X4Z2 | A0A074X4Y9 | Putative amino acid permease. | Shikimate-5-dehydrogenase. | 0.400 |
A0A074X4Z2 | A0A074X9U7 | Putative amino acid permease. | Shikimate. | 0.400 |
A0A074X4Z2 | A0A074XHC2 | Putative amino acid permease. | 2-epi-5-epi-valiolone synthase-like protein. | 0.400 |
A0A074X4Z2 | A0A074XYX9 | Putative amino acid permease. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.400 |
A0A074X4Z2 | A0A074YKG8 | Putative amino acid permease. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.583 |
A0A074X9U7 | A0A074X4Y9 | Shikimate. | Shikimate-5-dehydrogenase. | 0.717 |
A0A074X9U7 | A0A074X4Z2 | Shikimate. | Putative amino acid permease. | 0.400 |
A0A074X9U7 | A0A074XHC2 | Shikimate. | 2-epi-5-epi-valiolone synthase-like protein. | 0.809 |
A0A074X9U7 | A0A074YKG8 | Shikimate. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.891 |
A0A074XHC2 | A0A074X4Y9 | 2-epi-5-epi-valiolone synthase-like protein. | Shikimate-5-dehydrogenase. | 0.898 |
A0A074XHC2 | A0A074X4Z2 | 2-epi-5-epi-valiolone synthase-like protein. | Putative amino acid permease. | 0.400 |
A0A074XHC2 | A0A074X9U7 | 2-epi-5-epi-valiolone synthase-like protein. | Shikimate. | 0.809 |
A0A074XHC2 | A0A074YKG8 | 2-epi-5-epi-valiolone synthase-like protein. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.891 |
A0A074XYX9 | A0A074X4Z2 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Putative amino acid permease. | 0.400 |
A0A074XYX9 | A0A074YKG8 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.891 |
A0A074YKG8 | A0A074X4Y9 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Shikimate-5-dehydrogenase. | 0.899 |
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