STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074X5E4Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
A0A074YA72
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.994
A0A074YDB9
Putative splicing factor 3a subunit 2.
   
 0.979
A0A074XQV8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.976
A0A074Y4K1
Uncharacterized protein.
   
 0.976
A0A074XLP4
Splicing factor 3A subunit 3.
   
 0.972
A0A074Y4D6
Uncharacterized protein.
   
 
 0.963
A0A074XHT1
Uncharacterized protein.
    
 
 0.926
A0A074XT01
ARM repeat-containing protein.
   
 0.909
A0A074XSL8
RNA-binding domain-containing protein.
    
 
 0.898
A0A074XKB2
Putative endo-1,3(4)-beta-glucanase.
   
 
 0.887
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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