A0A074X818 protein (Aureobasidium pullulans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A074X818

Uncharacterized protein. (270 aa)

Predicted Functional Partners:

A0A074XBW0

0.880

A0A074XJS1

0.740

A0A074XE68

0.735

A0A074YPT2

0.735

A0A074YLS6

0.732

A0A074XLT2

0.731

A0A074XMB1

0.729

A0A074XNX0

0.729

A0A074XQ80

0.729

A0A074XWK3

0.725

Your Current Organism:

Aureobasidium pullulans

NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A074X818	A0A074XBW0	Uncharacterized protein.	Uncharacterized protein.	0.880
A0A074X818	A0A074XE68	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.735
A0A074X818	A0A074XJS1	Uncharacterized protein.	Mitotic spindle checkpoint component mad2.	0.740
A0A074X818	A0A074XLT2	Uncharacterized protein.	DUF1546-domain-containing protein.	0.731
A0A074X818	A0A074XMB1	Uncharacterized protein.	Kinase-like protein.	0.729
A0A074X818	A0A074XNX0	Uncharacterized protein.	Cell division control protein 2 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.729
A0A074X818	A0A074XQ80	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.729
A0A074X818	A0A074XWK3	Uncharacterized protein.	Uncharacterized protein.	0.725
A0A074X818	A0A074YLS6	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.732
A0A074X818	A0A074YPT2	Uncharacterized protein.	TFIID-31kDa-domain-containing protein.	0.735
A0A074XBW0	A0A074X818	Uncharacterized protein.	Uncharacterized protein.	0.880
A0A074XE68	A0A074X818	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.735
A0A074XE68	A0A074XLT2	TFIID_20kDa domain-containing protein.	DUF1546-domain-containing protein.	0.999
A0A074XE68	A0A074YLS6	TFIID_20kDa domain-containing protein.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.999
A0A074XE68	A0A074YPT2	TFIID_20kDa domain-containing protein.	TFIID-31kDa-domain-containing protein.	0.999
A0A074XJS1	A0A074X818	Mitotic spindle checkpoint component mad2.	Uncharacterized protein.	0.740
A0A074XJS1	A0A074XMB1	Mitotic spindle checkpoint component mad2.	Kinase-like protein.	0.874
A0A074XJS1	A0A074XNX0	Mitotic spindle checkpoint component mad2.	Cell division control protein 2 serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.895
A0A074XJS1	A0A074XQ80	Mitotic spindle checkpoint component mad2.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.895
A0A074XJS1	A0A074XWK3	Mitotic spindle checkpoint component mad2.	Uncharacterized protein.	0.999