STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074XCZ2RNase H domain-containing protein. (342 aa)    
Predicted Functional Partners:
A0A074XBQ9
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.875
A0A074XBB0
Thymidylate synthase.
    
 0.752
A0A074XXE9
Nucleoside diphosphate kinase; Belongs to the NDK family.
     
 0.727
A0A074XCK9
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.697
A0A074XRY6
Nudix hydrolase domain-containing protein.
    
  0.696
A0A074XKR6
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.682
A0A074XUS7
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.682
A0A074XUP6
Putative ssDNA binding protein.
   
 
 0.671
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.635
A0A074XGX3
ATP-NAD kinase.
    
  0.632
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.