STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074XST5Uncharacterized protein. (526 aa)    
Predicted Functional Partners:
A0A074X1N5
Uncharacterized protein.
    
 0.862
A0A074XUI1
Small nuclear ribonucleoprotein Sm D2.
    
 0.776
A0A074XDK2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.764
A0A074XI38
EEF1-gamma domain-containing protein.
    
  0.762
A0A074Y2D1
Elongation factor 1 gamma; Belongs to the GST superfamily.
    
  0.762
A0A074XB48
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.755
A0A074Y5X4
Small nuclear ribonucleoprotein G.
    
  0.752
A0A074X3I6
Ankyrin.
    
 0.745
A0A074XHS0
RNA-binding domain-containing protein.
    
 0.717
A0A074YML7
U1 small nuclear ribonucleo protein.
    
 0.717
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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