STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074XY85tRNA-dihydrouridine synthase. (324 aa)    
Predicted Functional Partners:
A0A074XSY5
Uncharacterized protein.
 
      0.660
A0A074YC13
tRNA guanosine-2'-O-methyltransferase.
   
  
 0.574
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
   
  
 0.545
A0A074XCM9
Prolyl-tRNA synthetase.
   
 
 0.538
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.523
A0A074XPG5
Pantoate-beta-alanine ligase.
  
    0.521
A0A074XB50
Prolyl-tRNA synthetase.
   
 
 0.519
A0A074XXJ5
tRNA methyltransferase complex GCD14 subunit.
   
  
 0.519
A0A074XYR1
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.517
A0A074XA22
Uncharacterized protein.
   
 
 0.499
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.