STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074Y671Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
A0A074XQB7
DNA repair protein.
    
 0.614
A0A074XB72
DNA polymerase.
   
 0.611
A0A074XWR6
SMN domain-containing protein.
    
 0.606
A0A074X3I6
Ankyrin.
    
  0.589
A0A074YII7
Nucleosome remodeling complex, CAF-I subunit.
    
  0.575
A0A074XMZ3
RanBD1 domain-containing protein.
    
  0.557
A0A074XDK2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.552
A0A074XB48
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.534
A0A074Y5X4
Small nuclear ribonucleoprotein G.
    
  0.523
A0A074YIT5
Cupredoxin.
    
  0.514
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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