STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074Y6G8rRNA-processing protein FCF2. (236 aa)    
Predicted Functional Partners:
A0A074X3K3
TRAUB-domain-containing protein.
   
 
 0.993
A0A074XHR6
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.993
A0A074XFY8
Sas10 domain-containing protein.
   
 
 0.992
A0A074XW99
Uncharacterized protein.
   
 
 0.992
A0A074XXD5
Putative ribosome biogenesis protein.
   
 
 0.991
A0A074X4X4
BING4CT-domain-containing protein.
   
 
 0.990
A0A074X8R0
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
   0.990
A0A074YLK7
U3 small nucleolar ribonucleo protein-like protein IMP4.
   
   0.990
A0A074X9G2
WD domain-containing protein.
   
 
 0.988
A0A074XI46
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.988
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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