STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074YDS82-nitropropane dioxygenase. (348 aa)    
Predicted Functional Partners:
A0A074XBQ4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.849
A0A074X1G1
tRNA pseudouridine synthase D.
    
 
 0.834
A0A074YM61
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.823
A0A074X9N1
60S ribosomal protein L26.
   
   0.817
A0A074XPK8
EngB-type G domain-containing protein.
   
 
 0.810
A0A074XHL6
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.807
A0A074Y0M2
Mitochondrial 54S ribosomal protein YmL9.
   
 
 0.805
A0A074XSA6
Ribosomal protein L15.
  
   0.798
A0A074XL61
Ribosomal protein L13.
  
   0.797
A0A074WYZ5
GTPase.
   
 
 0.788
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.