STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074YRK4RING/U-box. (115 aa)    
Predicted Functional Partners:
A0A074XIS5
CPSF_A domain-containing protein.
    
 0.999
A0A074XQP0
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.999
A0A074YRC5
POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.999
A0A074Y291
WD40 repeat-like protein.
    
 0.993
A0A074X9A6
Ubiquitin.
   
 0.991
A0A074XDC8
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.991
A0A074XRT5
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.986
A0A074X5V7
COP9 signalosome-like protein complex subunit 4.
   
 0.984
A0A074XRX7
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.984
A0A074YFX2
Putative NEDD8 conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.984
Your Current Organism:
Aureobasidium pullulans
NCBI taxonomy Id: 1043002
Other names: A. pullulans EXF-150, Aureobasidium pullulans EXF-150, Aureobasidium pullulans var. pullulans EXF-150
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