STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A074WKK0F-box domain-containing protein. (1102 aa)    
Predicted Functional Partners:
A0A074W4A5
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.965
A0A074W0N8
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.928
A0A074WWG0
RING/U-box.
    
 0.875
A0A074WA73
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.824
A0A074VJI7
Ribosomal protein L2.
    
 0.794
A0A074VMI1
Ubiquitin.
    
 0.774
A0A074VWJ2
UV excision repair protein Rad23.
    
 0.720
A0A074VZ03
Uncharacterized protein.
 
      0.685
A0A074WB81
E2_bind domain-containing protein.
   
  0.682
A0A074VE09
Uncharacterized protein.
    
 0.679
Your Current Organism:
Aureobasidium melanogenum
NCBI taxonomy Id: 1043003
Other names: A. melanogenum CBS 110374, Aureobasidium melanogenum CBS 110374, Aureobasidium pullulans var. melanogenum CBS 110374
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.