STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000224715_00344Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_000224715_00342
Unannotated protein.
 
  
  0.984
GCA_000224715_00343
Unannotated protein.
 
 
  0.984
GCA_000224715_02316
Unannotated protein.
 
 0.880
GCA_000224715_00959
Unannotated protein.
 
 
 0.843
GCA_000224715_02671
Unannotated protein.
 
   
  0.819
GCA_000224715_00958
Unannotated protein.
  
 
  0.807
GCA_000224715_01496
Unannotated protein.
    
  0.798
GCA_000224715_01736
Unannotated protein.
    
  0.798
GCA_000224715_03209
Unannotated protein.
  
  
 
0.787
GCA_000224715_02175
Unannotated protein.
 
   
  0.770
Your Current Organism:
Serinicoccus profundi
NCBI taxonomy Id: 1043205
Other names: S. profundi MCCC 1A05965, Serinicoccus profundi 0714S6-1, Serinicoccus profundi MCCC 1A05965, Serinicoccus profundi str. MCCC 1A05965, Serinicoccus profundi strain MCCC 1A05965, Serinicoccus sp. 0714S6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.