STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000224715_01246Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000224715_02023
Unannotated protein.
  
   
 0.632
GCA_000224715_01247
Unannotated protein.
       0.521
GCA_000224715_01506
Unannotated protein.
 
   
 0.458
Your Current Organism:
Serinicoccus profundi
NCBI taxonomy Id: 1043205
Other names: S. profundi MCCC 1A05965, Serinicoccus profundi 0714S6-1, Serinicoccus profundi MCCC 1A05965, Serinicoccus profundi str. MCCC 1A05965, Serinicoccus profundi strain MCCC 1A05965, Serinicoccus sp. 0714S6-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.