STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxlF_1Putative ABC transporter ATP-binding protein YxlF. (375 aa)    
Predicted Functional Partners:
KJL27370.1
ABC-2 family transporter protein.
 
  
 0.942
betI_1
HTH-type transcriptional regulator BetI.
 
   
 0.873
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily.
 
    
0.544
gsiA_4
Glutathione import ATP-binding protein GsiA.
 
     0.513
opuBA
Choline transport ATP-binding protein OpuBA.
 
    
0.512
ftsE_1
Cell division ATP-binding protein FtsE.
  
     0.511
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
    
0.511
drrB
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
  
 0.486
KJL19286.1
ABC-2 family transporter protein.
 
  
 0.424
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.