STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL26399.1Single-stranded DNA-binding protein. (171 aa)    
Predicted Functional Partners:
KJL26398.1
Hypothetical protein.
 
     0.916
KJL26400.1
TraM recognition site of TraD and TraG.
 
     0.914
KJL26401.1
Hypothetical protein.
 
     0.899
KJL26402.1
Hypothetical protein.
 
     0.884
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.758
int-Tn
Transposase from transposon Tn916.
 
   
 0.743
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
 0.698
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
   0.691
priA_2
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
   
 
 0.685
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
    0.682
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.