STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL26400.1TraM recognition site of TraD and TraG. (404 aa)    
Predicted Functional Partners:
KJL26401.1
Hypothetical protein.
     0.991
KJL26399.1
Single-stranded DNA-binding protein.
 
     0.914
KJL26402.1
Hypothetical protein.
 
     0.894
KJL26398.1
Hypothetical protein.
 
     0.875
int-Tn
Transposase from transposon Tn916.
 
   
 0.795
KJL26403.1
Hypothetical protein.
       0.483
KJL24144.1
Hypothetical protein.
 
 
 
 0.446
KJL27404.1
Hypothetical protein.
 
 
 
 0.433
KJL26579.1
Hypothetical protein.
    
   0.418
KJL29067.1
Hypothetical protein.
 
 
 
 0.417
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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