Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL25111.1 | KJL25112.1 | RN50_00570 | RN50_00571 | Vacuole effluxer Atg22 like protein. | RIO1 family protein. | 0.775 |
KJL25111.1 | nepI | RN50_00570 | RN50_00572 | Vacuole effluxer Atg22 like protein. | Purine ribonucleoside efflux pump NepI. | 0.447 |
KJL25111.1 | zitB | RN50_00570 | RN50_00569 | Vacuole effluxer Atg22 like protein. | Zinc transporter ZitB. | 0.701 |
KJL25112.1 | KJL25111.1 | RN50_00571 | RN50_00570 | RIO1 family protein. | Vacuole effluxer Atg22 like protein. | 0.775 |
KJL25112.1 | nepI | RN50_00571 | RN50_00572 | RIO1 family protein. | Purine ribonucleoside efflux pump NepI. | 0.447 |
KJL25112.1 | zitB | RN50_00571 | RN50_00569 | RIO1 family protein. | Zinc transporter ZitB. | 0.701 |
ldh2 | mdh | RN50_00948 | RN50_02604 | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.856 |
ldh2 | zitB | RN50_00948 | RN50_00569 | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | Zinc transporter ZitB. | 0.537 |
mdh | ldh2 | RN50_02604 | RN50_00948 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.856 |
mdh | zitB | RN50_02604 | RN50_00569 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | Zinc transporter ZitB. | 0.537 |
nepI | KJL25111.1 | RN50_00572 | RN50_00570 | Purine ribonucleoside efflux pump NepI. | Vacuole effluxer Atg22 like protein. | 0.447 |
nepI | KJL25112.1 | RN50_00572 | RN50_00571 | Purine ribonucleoside efflux pump NepI. | RIO1 family protein. | 0.447 |
nepI | zitB | RN50_00572 | RN50_00569 | Purine ribonucleoside efflux pump NepI. | Zinc transporter ZitB. | 0.412 |
zitB | KJL25111.1 | RN50_00569 | RN50_00570 | Zinc transporter ZitB. | Vacuole effluxer Atg22 like protein. | 0.701 |
zitB | KJL25112.1 | RN50_00569 | RN50_00571 | Zinc transporter ZitB. | RIO1 family protein. | 0.701 |
zitB | ldh2 | RN50_00569 | RN50_00948 | Zinc transporter ZitB. | L-lactate dehydrogenase 2; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.537 |
zitB | mdh | RN50_00569 | RN50_02604 | Zinc transporter ZitB. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.537 |
zitB | nepI | RN50_00569 | RN50_00572 | Zinc transporter ZitB. | Purine ribonucleoside efflux pump NepI. | 0.412 |