STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsE_1Cell division ATP-binding protein FtsE. (257 aa)    
Predicted Functional Partners:
KJL23693.1
Hypothetical protein.
 
 
 0.912
ytrF
ABC transporter permease YtrF precursor.
  
 
 0.819
KJL23694.1
Hypothetical protein.
       0.773
yxlF_6
Putative ABC transporter ATP-binding protein YxlF.
  
     0.761
ecsA_1
ABC-type transporter ATP-binding protein EcsA.
  
     0.750
macB_2
Macrolide export ATP-binding/permease protein MacB.
 
 0.690
cysS
Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.624
KJL23695.1
Hypothetical protein.
       0.610
KJL26955.1
FtsX-like permease family protein.
 
 
 0.586
pheS
Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.586
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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