Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL23706.1 | KJL23708.1 | RN50_01046 | RN50_01048 | Hypothetical protein. | A-factor biosynthesis hotdog domain protein. | 0.422 |
KJL23706.1 | arpA_2 | RN50_01046 | RN50_01049 | Hypothetical protein. | A-factor receptor protein. | 0.410 |
KJL23706.1 | fabG_6 | RN50_01046 | RN50_01047 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.422 |
KJL23708.1 | KJL23706.1 | RN50_01048 | RN50_01046 | A-factor biosynthesis hotdog domain protein. | Hypothetical protein. | 0.422 |
KJL23708.1 | arpA_2 | RN50_01048 | RN50_01049 | A-factor biosynthesis hotdog domain protein. | A-factor receptor protein. | 0.752 |
KJL23708.1 | fabG_6 | RN50_01048 | RN50_01047 | A-factor biosynthesis hotdog domain protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.778 |
arpA_2 | KJL23706.1 | RN50_01049 | RN50_01046 | A-factor receptor protein. | Hypothetical protein. | 0.410 |
arpA_2 | KJL23708.1 | RN50_01049 | RN50_01048 | A-factor receptor protein. | A-factor biosynthesis hotdog domain protein. | 0.752 |
arpA_2 | fabG_6 | RN50_01049 | RN50_01047 | A-factor receptor protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.751 |
fabG_6 | KJL23706.1 | RN50_01047 | RN50_01046 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | Hypothetical protein. | 0.422 |
fabG_6 | KJL23708.1 | RN50_01047 | RN50_01048 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | A-factor biosynthesis hotdog domain protein. | 0.778 |
fabG_6 | arpA_2 | RN50_01047 | RN50_01049 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | A-factor receptor protein. | 0.751 |