Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DprA | KJL20092.1 | RN50_02913 | RN50_02271 | Hypothetical protein. | ComEC family competence protein. | 0.870 |
DprA | comEA | RN50_02913 | RN50_02291 | Hypothetical protein. | ComE operon protein 1. | 0.535 |
DprA | outO | RN50_02913 | RN50_01297 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.761 |
KJL20092.1 | DprA | RN50_02271 | RN50_02913 | ComEC family competence protein. | Hypothetical protein. | 0.870 |
KJL20092.1 | comEA | RN50_02271 | RN50_02291 | ComEC family competence protein. | ComE operon protein 1. | 0.862 |
KJL20092.1 | outO | RN50_02271 | RN50_01297 | ComEC family competence protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.832 |
KJL22618.1 | KJL22620.1 | RN50_01296 | RN50_01298 | Hypothetical protein. | Hypothetical protein. | 0.455 |
KJL22618.1 | KJL22621.1 | RN50_01296 | RN50_01299 | Hypothetical protein. | CYTH domain protein. | 0.455 |
KJL22618.1 | dinB_1 | RN50_01296 | RN50_01295 | Hypothetical protein. | DNA polymerase IV. | 0.996 |
KJL22618.1 | dnaE2_1 | RN50_01296 | RN50_01294 | Hypothetical protein. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.981 |
KJL22618.1 | outO | RN50_01296 | RN50_01297 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.531 |
KJL22620.1 | KJL22618.1 | RN50_01298 | RN50_01296 | Hypothetical protein. | Hypothetical protein. | 0.455 |
KJL22620.1 | KJL22621.1 | RN50_01298 | RN50_01299 | Hypothetical protein. | CYTH domain protein. | 0.784 |
KJL22620.1 | dinB_1 | RN50_01298 | RN50_01295 | Hypothetical protein. | DNA polymerase IV. | 0.455 |
KJL22620.1 | dnaE2_1 | RN50_01298 | RN50_01294 | Hypothetical protein. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.455 |
KJL22620.1 | outO | RN50_01298 | RN50_01297 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.651 |
KJL22620.1 | ubiG_1 | RN50_01298 | RN50_01301 | Hypothetical protein. | Ubiquinone biosynthesis O-methyltransferase. | 0.603 |
KJL22621.1 | KJL22618.1 | RN50_01299 | RN50_01296 | CYTH domain protein. | Hypothetical protein. | 0.455 |
KJL22621.1 | KJL22620.1 | RN50_01299 | RN50_01298 | CYTH domain protein. | Hypothetical protein. | 0.784 |
KJL22621.1 | dinB_1 | RN50_01299 | RN50_01295 | CYTH domain protein. | DNA polymerase IV. | 0.455 |
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