Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL17721.1 | KJL22300.1 | RN50_02819 | RN50_01418 | PAC2 family protein. | MaoC like domain protein; Belongs to the UPF0336 family. | 0.533 |
KJL20001.1 | KJL22299.1 | RN50_02178 | RN50_01417 | Hypothetical protein. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.489 |
KJL20001.1 | KJL22300.1 | RN50_02178 | RN50_01418 | Hypothetical protein. | MaoC like domain protein; Belongs to the UPF0336 family. | 0.605 |
KJL20001.1 | KJL22640.1 | RN50_02178 | RN50_01318 | Hypothetical protein. | Hypothetical protein. | 0.419 |
KJL20001.1 | fabD | RN50_02178 | RN50_02179 | Hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.841 |
KJL22297.1 | KJL22299.1 | RN50_01415 | RN50_01417 | Hypothetical protein. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.586 |
KJL22297.1 | KJL22300.1 | RN50_01415 | RN50_01418 | Hypothetical protein. | MaoC like domain protein; Belongs to the UPF0336 family. | 0.586 |
KJL22297.1 | KJL22301.1 | RN50_01415 | RN50_01419 | Hypothetical protein. | Sulfite exporter TauE/SafE. | 0.502 |
KJL22297.1 | murB | RN50_01415 | RN50_01416 | Hypothetical protein. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.586 |
KJL22299.1 | KJL20001.1 | RN50_01417 | RN50_02178 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Hypothetical protein. | 0.489 |
KJL22299.1 | KJL22297.1 | RN50_01417 | RN50_01415 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Hypothetical protein. | 0.586 |
KJL22299.1 | KJL22300.1 | RN50_01417 | RN50_01418 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | MaoC like domain protein; Belongs to the UPF0336 family. | 0.999 |
KJL22299.1 | KJL22301.1 | RN50_01417 | RN50_01419 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Sulfite exporter TauE/SafE. | 0.676 |
KJL22299.1 | KJL22640.1 | RN50_01417 | RN50_01318 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Hypothetical protein. | 0.408 |
KJL22299.1 | fabD | RN50_01417 | RN50_02179 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Malonyl CoA-acyl carrier protein transacylase. | 0.471 |
KJL22299.1 | fadB | RN50_01417 | RN50_02685 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Fatty acid oxidation complex subunit alpha. | 0.550 |
KJL22299.1 | katA | RN50_01417 | RN50_00376 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | Catalase; Belongs to the catalase family. | 0.680 |
KJL22299.1 | murB | RN50_01417 | RN50_01416 | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.854 |
KJL22300.1 | KJL17721.1 | RN50_01418 | RN50_02819 | MaoC like domain protein; Belongs to the UPF0336 family. | PAC2 family protein. | 0.533 |
KJL22300.1 | KJL20001.1 | RN50_01418 | RN50_02178 | MaoC like domain protein; Belongs to the UPF0336 family. | Hypothetical protein. | 0.605 |
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