STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL20953.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
KJL20952.1
Bacterial type II secretion system protein F domain protein.
 
   
 0.855
KJL20954.1
Hypothetical protein.
       0.840
KJL20951.1
Putative conjugal transfer protein.
     
 0.754
KJL17804.1
DivIVA protein.
  
     0.754
KJL20955.1
Hypothetical protein.
       0.747
KJL18161.1
Hypothetical protein.
  
     0.675
KJL17854.1
Hypothetical protein.
  
     0.614
KJL17799.1
Hypothetical protein.
  
     0.560
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
     0.480
KJL22656.1
Cell wall synthesis protein Wag31.
  
     0.479
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.