Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL20185.1 | arsC2_2 | RN50_02029 | RN50_02030 | Hypothetical protein. | Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.549 |
KJL20185.1 | nhaA_2 | RN50_02029 | RN50_02028 | Hypothetical protein. | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.581 |
KJL26810.1 | nhaA_2 | RN50_00176 | RN50_02028 | CHAT domain protein. | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.685 |
arsC2_2 | KJL20185.1 | RN50_02030 | RN50_02029 | Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein. | 0.549 |
arsC2_2 | nhaA_2 | RN50_02030 | RN50_02028 | Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.428 |
nhaA_2 | KJL20185.1 | RN50_02028 | RN50_02029 | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Hypothetical protein. | 0.581 |
nhaA_2 | KJL26810.1 | RN50_02028 | RN50_00176 | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | CHAT domain protein. | 0.685 |
nhaA_2 | arsC2_2 | RN50_02028 | RN50_02030 | Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.428 |