Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL18109.1 | KJL18250.1 | RN50_03216 | RN50_03359 | Hypothetical protein. | Hypothetical protein. | 0.720 |
KJL18109.1 | yabI_2 | RN50_03216 | RN50_02294 | Hypothetical protein. | Inner membrane protein YabI. | 0.435 |
KJL18250.1 | KJL18109.1 | RN50_03359 | RN50_03216 | Hypothetical protein. | Hypothetical protein. | 0.720 |
KJL18250.1 | yabI_2 | RN50_03359 | RN50_02294 | Hypothetical protein. | Inner membrane protein YabI. | 0.424 |
KJL20116.1 | KJL20117.1 | RN50_02295 | RN50_02296 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL20116.1 | yabI_2 | RN50_02295 | RN50_02294 | Hypothetical protein. | Inner membrane protein YabI. | 0.861 |
KJL20117.1 | KJL20116.1 | RN50_02296 | RN50_02295 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL20117.1 | yabI_2 | RN50_02296 | RN50_02294 | Hypothetical protein. | Inner membrane protein YabI. | 0.476 |
leuS | pabB | RN50_02292 | RN50_02293 | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Aminodeoxychorismate synthase component 1. | 0.782 |
leuS | yabI_2 | RN50_02292 | RN50_02294 | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Inner membrane protein YabI. | 0.542 |
pabB | leuS | RN50_02293 | RN50_02292 | Aminodeoxychorismate synthase component 1. | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.782 |
pabB | yabI_2 | RN50_02293 | RN50_02294 | Aminodeoxychorismate synthase component 1. | Inner membrane protein YabI. | 0.588 |
yabI_2 | KJL18109.1 | RN50_02294 | RN50_03216 | Inner membrane protein YabI. | Hypothetical protein. | 0.435 |
yabI_2 | KJL18250.1 | RN50_02294 | RN50_03359 | Inner membrane protein YabI. | Hypothetical protein. | 0.424 |
yabI_2 | KJL20116.1 | RN50_02294 | RN50_02295 | Inner membrane protein YabI. | Hypothetical protein. | 0.861 |
yabI_2 | KJL20117.1 | RN50_02294 | RN50_02296 | Inner membrane protein YabI. | Hypothetical protein. | 0.476 |
yabI_2 | leuS | RN50_02294 | RN50_02292 | Inner membrane protein YabI. | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.542 |
yabI_2 | pabB | RN50_02294 | RN50_02293 | Inner membrane protein YabI. | Aminodeoxychorismate synthase component 1. | 0.588 |