Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL19104.1 | KJL21747.1 | RN50_02383 | RN50_01647 | Hypothetical protein. | Hypothetical protein. | 0.615 |
KJL19104.1 | glnH_2 | RN50_02383 | RN50_02382 | Hypothetical protein. | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.441 |
KJL19104.1 | mepM_4 | RN50_02383 | RN50_02533 | Hypothetical protein. | Murein DD-endopeptidase MepM. | 0.514 |
KJL19104.1 | pepN_1 | RN50_02383 | RN50_02385 | Hypothetical protein. | Aminopeptidase N. | 0.782 |
KJL19104.1 | tycC | RN50_02383 | RN50_02384 | Hypothetical protein. | Tyrocidine synthase 3. | 0.782 |
KJL21747.1 | KJL19104.1 | RN50_01647 | RN50_02383 | Hypothetical protein. | Hypothetical protein. | 0.615 |
glnH_2 | KJL19104.1 | RN50_02382 | RN50_02383 | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Hypothetical protein. | 0.441 |
glnH_2 | pepN_1 | RN50_02382 | RN50_02385 | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Aminopeptidase N. | 0.459 |
glnH_2 | tycC | RN50_02382 | RN50_02384 | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Tyrocidine synthase 3. | 0.472 |
mepM_4 | KJL19104.1 | RN50_02533 | RN50_02383 | Murein DD-endopeptidase MepM. | Hypothetical protein. | 0.514 |
pepN_1 | KJL19104.1 | RN50_02385 | RN50_02383 | Aminopeptidase N. | Hypothetical protein. | 0.782 |
pepN_1 | glnH_2 | RN50_02385 | RN50_02382 | Aminopeptidase N. | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.459 |
pepN_1 | tycC | RN50_02385 | RN50_02384 | Aminopeptidase N. | Tyrocidine synthase 3. | 0.962 |
tycC | KJL19104.1 | RN50_02384 | RN50_02383 | Tyrocidine synthase 3. | Hypothetical protein. | 0.782 |
tycC | glnH_2 | RN50_02384 | RN50_02382 | Tyrocidine synthase 3. | Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.472 |
tycC | pepN_1 | RN50_02384 | RN50_02385 | Tyrocidine synthase 3. | Aminopeptidase N. | 0.962 |