Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
citSSensor protein CitS. (422 aa)    
Predicted Functional Partners:
dcuR_1
Transcriptional regulatory protein DcuR.
 
 
 0.964
dcuR_2
Transcriptional regulatory protein DcuR.
 
 
 0.810
KJL19173.1
Tripartite tricarboxylate transporter family receptor.
 
    0.715
KJL19172.1
Tripartite tricarboxylate transporter TctB family protein.
 
     0.687
KJL19171.1
Tripartite tricarboxylate transporter TctA family protein.
 
     0.683
dpiA
Transcriptional regulatory protein DpiA.
 
 
 0.670
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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