Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJL19195.1Cupin domain protein. (252 aa)    
Predicted Functional Partners:
epsL
Putative sugar transferase EpsL.
  
  
 0.874
rfbC
Putative dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.826
ycjS_1
Putative oxidoreductase YcjS.
 
     0.806
ydgJ
Putative oxidoreductase YdgJ.
       0.781
cytR_7
HTH-type transcriptional repressor CytR.
       0.545
KJL23088.1
Xylose isomerase-like TIM barrel.
 
     0.534
yesX_1
Rhamnogalacturonan exolyase YesX.
  
     0.533
ghrA
Glyoxylate/hydroxypyruvate reductase A.
       0.521
ripA
HTH-type transcriptional repressor of iron proteins A.
  
 
 0.513
btr
HTH-type transcriptional activator Btr.
  
 
 0.513
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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