STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL17574.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
gyrB_2
DNA gyrase subunit B.
 
     0.768
KJL17725.1
Type III restriction enzyme, res subunit.
 
     0.592
KJL26550.1
Hypothetical protein.
  
     0.503
KJL17595.1
Hypothetical protein.
  
     0.475
KJL23157.1
Hypothetical protein.
  
     0.460
KJL17587.1
Hypothetical protein.
  
     0.446
caeA
Carboxylesterase A precursor.
  
     0.433
KJL18044.1
Hypothetical protein.
  
     0.408
rsmC_1
Ribosomal RNA small subunit methyltransferase C; Belongs to the methyltransferase superfamily.
  
     0.407
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
     0.400
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.