Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL17636.1 | garP | RN50_02733 | RN50_02795 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Putative galactarate transporter. | 0.627 |
KJL17636.1 | moeZ | RN50_02733 | RN50_02046 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.477 |
KJL17636.1 | sumT | RN50_02733 | RN50_02732 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Uroporphyrinogen-III C-methyltransferase. | 0.995 |
KJL17696.1 | KJL17698.1 | RN50_02794 | RN50_02796 | Acetyltransferase (GNAT) family protein. | Glyoxalase-like domain protein. | 0.543 |
KJL17696.1 | garP | RN50_02794 | RN50_02795 | Acetyltransferase (GNAT) family protein. | Putative galactarate transporter. | 0.726 |
KJL17696.1 | nodA | RN50_02794 | RN50_02797 | Acetyltransferase (GNAT) family protein. | Nodulation protein A. | 0.573 |
KJL17698.1 | KJL17696.1 | RN50_02796 | RN50_02794 | Glyoxalase-like domain protein. | Acetyltransferase (GNAT) family protein. | 0.543 |
KJL17698.1 | garP | RN50_02796 | RN50_02795 | Glyoxalase-like domain protein. | Putative galactarate transporter. | 0.587 |
KJL17698.1 | nodA | RN50_02796 | RN50_02797 | Glyoxalase-like domain protein. | Nodulation protein A. | 0.773 |
garP | KJL17636.1 | RN50_02795 | RN50_02733 | Putative galactarate transporter. | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | 0.627 |
garP | KJL17696.1 | RN50_02795 | RN50_02794 | Putative galactarate transporter. | Acetyltransferase (GNAT) family protein. | 0.726 |
garP | KJL17698.1 | RN50_02795 | RN50_02796 | Putative galactarate transporter. | Glyoxalase-like domain protein. | 0.587 |
garP | moaA | RN50_02795 | RN50_02041 | Putative galactarate transporter. | Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.405 |
garP | moeZ | RN50_02795 | RN50_02046 | Putative galactarate transporter. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.433 |
garP | nodA | RN50_02795 | RN50_02797 | Putative galactarate transporter. | Nodulation protein A. | 0.572 |
garP | sumT | RN50_02795 | RN50_02732 | Putative galactarate transporter. | Uroporphyrinogen-III C-methyltransferase. | 0.694 |
moaA | garP | RN50_02041 | RN50_02795 | Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | Putative galactarate transporter. | 0.405 |
moaA | moeZ | RN50_02041 | RN50_02046 | Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.862 |
moaA | sumT | RN50_02041 | RN50_02732 | Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | Uroporphyrinogen-III C-methyltransferase. | 0.534 |
moeZ | KJL17636.1 | RN50_02046 | RN50_02733 | Putative adenylyltransferase/sulfurtransferase MoeZ. | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | 0.477 |
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