Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL17713.1 | KJL17716.1 | RN50_02811 | RN50_02814 | Ski2-like helicase. | Hypothetical protein. | 0.771 |
KJL17713.1 | KJL17717.1 | RN50_02811 | RN50_02815 | Ski2-like helicase. | Hypothetical protein. | 0.783 |
KJL17713.1 | KJL17718.1 | RN50_02811 | RN50_02816 | Ski2-like helicase. | Hypothetical protein. | 0.729 |
KJL17713.1 | KJL17720.1 | RN50_02811 | RN50_02818 | Ski2-like helicase. | Phosphorylated carbohydrates phosphatase. | 0.740 |
KJL17713.1 | KJL17721.1 | RN50_02811 | RN50_02819 | Ski2-like helicase. | PAC2 family protein. | 0.667 |
KJL17713.1 | lnt | RN50_02811 | RN50_02810 | Ski2-like helicase. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.847 |
KJL17713.1 | tatA | RN50_02811 | RN50_02813 | Ski2-like helicase. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.854 |
KJL17713.1 | tatC2 | RN50_02811 | RN50_02812 | Ski2-like helicase. | Sec-independent protein translocase protein TatCy; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.854 |
KJL17713.1 | trmI | RN50_02811 | RN50_02817 | Ski2-like helicase. | tRNA (adenine(58)-N(1))-methyltransferase TrmI. | 0.820 |
KJL17716.1 | KJL17713.1 | RN50_02814 | RN50_02811 | Hypothetical protein. | Ski2-like helicase. | 0.771 |
KJL17716.1 | KJL17717.1 | RN50_02814 | RN50_02815 | Hypothetical protein. | Hypothetical protein. | 0.981 |
KJL17716.1 | KJL17718.1 | RN50_02814 | RN50_02816 | Hypothetical protein. | Hypothetical protein. | 0.789 |
KJL17716.1 | KJL17720.1 | RN50_02814 | RN50_02818 | Hypothetical protein. | Phosphorylated carbohydrates phosphatase. | 0.784 |
KJL17716.1 | KJL17721.1 | RN50_02814 | RN50_02819 | Hypothetical protein. | PAC2 family protein. | 0.634 |
KJL17716.1 | lnt | RN50_02814 | RN50_02810 | Hypothetical protein. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.721 |
KJL17716.1 | tatA | RN50_02814 | RN50_02813 | Hypothetical protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.740 |
KJL17716.1 | tatC2 | RN50_02814 | RN50_02812 | Hypothetical protein. | Sec-independent protein translocase protein TatCy; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.731 |
KJL17716.1 | trmI | RN50_02814 | RN50_02817 | Hypothetical protein. | tRNA (adenine(58)-N(1))-methyltransferase TrmI. | 0.803 |
KJL17717.1 | KJL17713.1 | RN50_02815 | RN50_02811 | Hypothetical protein. | Ski2-like helicase. | 0.783 |
KJL17717.1 | KJL17716.1 | RN50_02815 | RN50_02814 | Hypothetical protein. | Hypothetical protein. | 0.981 |
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