STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsH_2Putative glycosyltransferase EpsH. (280 aa)    
Predicted Functional Partners:
KJL17758.1
Endonuclease/Exonuclease/phosphatase family protein.
 
    0.807
KJL26373.1
Hypothetical protein.
  
 
 0.694
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
     0.675
KJL19069.1
Hypothetical protein.
  
 
 0.664
KJL23184.1
Polysaccharide deacetylase.
  
  
 0.655
KJL26903.1
Prenyltransferase.
 
     0.642
KJL26905.1
Hypothetical protein.
 
     0.636
KJL26904.1
Hypothetical protein.
 
     0.614
KJL17756.1
Hypothetical protein.
 
     0.585
epsL
Putative sugar transferase EpsL.
 
   
 0.511
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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