STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL18086.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
KJL18087.1
Hypothetical protein.
 
     0.853
pdtaS
Putative sensor histidine kinase pdtaS.
       0.712
KJL18108.1
Hypothetical protein.
  
   
 0.633
KJL18250.1
Hypothetical protein.
  
     0.604
KJL20092.1
ComEC family competence protein.
 
  
 0.560
KJL18109.1
Hypothetical protein.
  
 
   0.537
KJL17975.1
Hypothetical protein.
  
     0.531
KJL21757.1
Hypothetical protein.
  
     0.529
KJL23129.1
TadE-like protein.
  
    0.509
KJL18048.1
Hypothetical protein.
 
  
 0.505
Your Current Organism:
Microbacterium foliorum
NCBI taxonomy Id: 104336
Other names: CIP 107137, DSM 12966, JCM 11569, LMG 19580, LMG:19580, M. foliorum, Microbacterium foliorum Behrendt et al. 2001, NBRC 103072, NRRL:B-24224, strain P 333/02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.