Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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Databases
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[Homology]
Score
EH31_02065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)    
Predicted Functional Partners:
EH31_09675
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.884
EH31_02070
Dihydrolipoamide acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.872
EH31_09690
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.864
EH31_02075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.842
EH31_09670
Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.790
EH31_09695
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
EH31_09665
Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.779
EH31_15350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.746
EH31_09685
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.744
EH31_07400
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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