STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_02445Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.774
EH31_02450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
EH31_02455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
EH31_02470
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
EH31_02465
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
EH31_02440
3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
       0.504
EH31_16255
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.485
EH31_15570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
EH31_16105
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
EH31_02425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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