STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_02485Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
EH31_08305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
EH31_15860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
EH31_15865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
EH31_02490
Phosphoribosylglycinamide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.781
EH31_07570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
EH31_16110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
EH31_11135
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
EH31_14215
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
rne
Ribonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
       0.687
EH31_16405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.