STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_04480Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
EH31_08570
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.929
EH31_12070
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.929
EH31_13715
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.929
EH31_04475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
EH31_04485
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.
       0.535
EH31_04490
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
EH31_15305
Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
EH31_07320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
EH31_15420
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.450
EH31_16890
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.450
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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