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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_05005Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (702 aa)    
Predicted Functional Partners:
EH31_14500
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.974
EH31_08120
Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.971
EH31_14270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.971
EH31_13090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
EH31_03595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.932
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.919
EH31_08495
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
EH31_05020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.860
EH31_05425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.852
EH31_00980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.830
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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