STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_05145Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
EH31_05110
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.860
EH31_05115
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.819
EH31_00285
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.636
EH31_12135
Nicotinate-nucleotide pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.
   
 0.634
EH31_11525
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.629
EH31_08205
4-dihydromethyl-trisporate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.620
cobB
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
  
 0.580
EH31_11990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.568
EH31_14535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.556
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.551
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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