STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_06500Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (948 aa)    
Predicted Functional Partners:
EH31_06505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.802
EH31_10710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
EH31_13050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
EH31_13070
Alginate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
EH31_13080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
EH31_13045
Alginate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
EH31_08835
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.646
EH31_08840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
EH31_13035
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
EH31_09555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.