STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_07085Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
EH31_07090
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.823
EH31_15455
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.780
EH31_15800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.734
EH31_15465
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
EH31_16860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
EH31_00965
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.723
EH31_05305
Alpha-amlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.722
EH31_06855
WalW protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
EH31_02570
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.684
EH31_14260
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.677
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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