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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_07950Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (722 aa)    
Predicted Functional Partners:
EH31_12390
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
EH31_07945
4-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
EH31_14465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
EH31_09650
Dipeptidyl carboxypeptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
EH31_02790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.458
EH31_03135
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
EH31_06095
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.419
EH31_07960
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.406
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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