Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EH31_08045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
EH31_08050
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.707
EH31_08055
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
EH31_16755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
EH31_08060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
EH31_11490
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
EH31_15050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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