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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_08780Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
EH31_08785
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.913
EH31_08790
Magnesium chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
    0.838
EH31_08755
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.781
EH31_08775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
EH31_08630
Photosynthetic complex assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.767
bchN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
    0.767
pufL
Photosynthetic reaction center subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the reaction center PufL/M/PsbA/D family.
  
    0.767
EH31_08635
Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.765
EH31_08670
Restriction endonuclease EcoEI subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.765
EH31_08640
Protein pucC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.764
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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