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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_09285Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (162 aa)    
Predicted Functional Partners:
EH31_09280
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.973
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.938
EH31_05010
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.768
EH31_05085
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.622
EH31_00955
Isocitrate lyase; Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.613
EH31_14245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.562
EH31_08635
Photosynthetic reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.550
EH31_13945
Cytochrome Cbb3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
  
 0.523
EH31_13860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
  
 0.447
EH31_05035
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.431
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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