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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_09415Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1159 aa)    
Predicted Functional Partners:
EH31_05200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.612
EH31_00390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
EH31_04810
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.584
EH31_06635
Conjugal transfer protein TraA; MobA/MobL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
EH31_16275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
EH31_15750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
EH31_09420
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.523
EH31_08710
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.503
EH31_14110
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.501
EH31_04825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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