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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_09795Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa)    
Predicted Functional Partners:
EH31_09800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
EH31_03265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.962
bpt
arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
       0.714
bamA
Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
   
 0.689
pal
Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
    0.596
EH31_02175
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
EH31_06230
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.513
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.510
EH31_12380
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
EH31_07495
Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.