STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_10545Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
EH31_10555
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.825
EH31_10550
Conjugal transfer protein TraK; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.821
EH31_10540
Conjugal transfer protein TraL; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.818
EH31_10560
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
      0.808
EH31_10585
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
EH31_10600
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
EH31_10570
(4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
EH31_10590
Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
EH31_10565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
EH31_10575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.