STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_11970Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
EH31_11945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.941
EH31_11965
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.881
EH31_11960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
EH31_11950
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
EH31_08210
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.729
EH31_11955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.691
EH31_12200
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.668
EH31_15305
Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.583
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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