STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH31_12355LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
EH31_12360
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
EH31_12125
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
EH31_08120
Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.688
EH31_14270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.599
EH31_05395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.591
EH31_03455
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.568
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.515
EH31_05425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.504
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
    0.464
EH31_15280
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.438
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.