Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EH31_13745Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
EH31_13750
Translation repressor RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
EH31_13760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
EH31_13755
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
EH31_02845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.737
EH31_10260
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.737
EH31_13765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
EH31_13735
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
EH31_13740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
Your Current Organism:
Erythrobacter longus
NCBI taxonomy Id: 1044
Other names: ATCC 33941, CIP 104268, DSM 6997, E. longus, IFO 14126, JCM 6170, NBRC 14126, strain OCh101
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